4J88
Dark-state structure of sfGFP containing the unnatural amino acid p-azido-phenylalanine at residue 66
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-12-04 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.430, 97.560, 102.900 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.780 - 2.080 |
R-factor | 0.1684 |
Rwork | 0.165 |
R-free | 0.22820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2b3p |
RMSD bond length | 0.021 |
RMSD bond angle | 1.194 |
Data reduction software | xia2 |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 102.900 | 102.900 | 2.130 |
High resolution limit [Å] | 2.080 | 9.300 | 2.080 |
Rmerge | 0.131 | 0.035 | 0.818 |
Total number of observations | 2909 | 19051 | |
Number of reflections | 32505 | ||
<I/σ(I)> | 13.6 | 16.4 | 0.9 |
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 7.9 | 6.6 | 8.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.3 | 278 | 10 mg/mL protein and 100 mM Tris-HCl, pH 8.3, 2.8 M (NH4)2SO4 (200+200 nanoL drop against 60 microL reservoir), VAPOR DIFFUSION, SITTING DROP, temperature 278K |