4IFT
Crystal structure of double mutant thermostable NPPase from Geobacillus stearothermophilus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-11-18 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.97915 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 38.822, 83.287, 176.024 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.112 - 1.995 |
R-factor | 0.1806 |
Rwork | 0.178 |
R-free | 0.22720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3pdw |
RMSD bond length | 0.008 |
RMSD bond angle | 1.070 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX (dev_1186) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.030 |
High resolution limit [Å] | 1.995 | 5.430 | 1.995 |
Rmerge | 0.037 | 0.025 | 0.067 |
Number of reflections | 35856 | ||
<I/σ(I)> | 31.6 | ||
Completeness [%] | 89.9 | 67.5 | 96.7 |
Redundancy | 2.5 | 2.6 | 2.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 0.1M HEPES sodium, 2.0M Ammonium sulfate, 3% PEG400, 30% Glycerol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |