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4IFP

X-ray Crystal Structure of Human NLRP1 CARD Domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]298
Wavelength(s)0.97
Spacegroup nameC 1 2 1
Unit cell lengths187.011, 108.772, 121.266
Unit cell angles90.00, 120.98, 90.00
Refinement procedure
Resolution37.492 - 1.995
R-factor0.1719
Rwork0.170
R-free0.20760
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3VD8 and 3KAT
RMSD bond length0.007
RMSD bond angle1.055
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: dev_1217))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.030
High resolution limit [Å]1.9951.995
Rmerge0.1490.783
Number of reflections139624
<I/σ(I)>9.42.72
Completeness [%]99.599.6
Redundancy4.24
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.42981.4 M Malonate, 100 mM HEPES 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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PDB entries from 2025-06-11

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