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4I6L

Crystal structure of OTUB1 in complex with ubiquitin variant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]93
Detector technologyPIXEL
Collection date2012-07-03
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9795
Spacegroup nameC 2 2 21
Unit cell lengths92.444, 109.069, 73.238
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.222 - 2.488
R-factor0.2218
Rwork0.220
R-free0.26630
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2zfy 1ubq
RMSD bond length0.003
RMSD bond angle0.715
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.690
High resolution limit [Å]2.5002.590
Number of reflections12681
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52930.2 M ammonium sulfate, 0.1 M MES, pH 6.5, and 20% (w/v) PEG8000, VAPOR DIFFUSION, SITTING DROP, temperature 293K

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