4I1T
Crystal structure of the cap-snatching endonuclease from Pichinde virus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-06-09 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.97946 |
Spacegroup name | P 64 2 2 |
Unit cell lengths | 142.962, 142.962, 46.835 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.795 - 2.800 |
R-factor | 0.2387 |
Rwork | 0.236 |
R-free | 0.29440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3jsb |
RMSD bond length | 0.009 |
RMSD bond angle | 1.208 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | PHENIX (1.6.1_357) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.850 |
High resolution limit [Å] | 2.800 | 7.590 | 2.800 |
Rmerge | 0.088 | 0.039 | 0.620 |
Number of reflections | 7360 | ||
<I/σ(I)> | 29.87 | 97.81 | 3.77 |
Completeness [%] | 99.8 | 100 | 97.8 |
Redundancy | 15.1 | 24.5 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 6M ammonium nitrate, 0.1M Tris, pH 8.5, vapor diffusion, sitting drop, temperature 298K |