4GQL
Crystal structure of the catalytic domain of Human MMP12 in complex with selective phosphinic inhibitor RXP470.1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-02-23 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979300 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 69.580, 63.390, 36.900 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.599 - 1.150 |
R-factor | 0.1343 |
Rwork | 0.133 |
R-free | 0.15450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3tsk |
RMSD bond length | 0.008 |
RMSD bond angle | 1.500 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | PHENIX ((phenix.refine: 1.8_1069)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.220 |
High resolution limit [Å] | 1.150 | 3.440 | 1.150 |
Rmerge | 0.091 | 0.032 | 1.300 |
Number of reflections | 58014 | ||
<I/σ(I)> | 15.78 | 41.73 | 2.3 |
Completeness [%] | 98.6 | 82.4 | 96.5 |
Redundancy | 6.9 | 5.77 | 6.73 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | Reservoir: 25% PEG 10000, 0.2M imidazole malate. Cryoprotectant: 27% PEG 8000, 15% MPEG 550, 10% glycerol, .01M hydroxamic acid, 90mM Tris-HCl, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K |