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4GHF

Structure of Y257F variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with 4-Nitrocatechol and dioxygen at 1.67 Ang resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2010-05-17
DetectorPSI PILATUS 6M
Wavelength(s)0.9999
Spacegroup nameP 21 21 2
Unit cell lengths110.519, 150.318, 96.105
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution89.040 - 1.670
R-factor0.15236
Rwork0.151
R-free0.18052
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ojt
RMSD bond length0.015
RMSD bond angle1.616
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareREFMAC (5.6.0117)
Refinement softwareREFMAC (5.6.0117)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]96.1101.760
High resolution limit [Å]1.6701.670
Rmerge0.0350.427
Number of reflections184533
<I/σ(I)>13.52
Completeness [%]99.6
Redundancy4.74.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29313% PEG6000, 0.1M calcium chloride, 0.1M Tris-HCl. Cryoprotectant 25% PEG400. Ligand soaking: 2mM 4-nitrocatechol under aerobic conditions for 1hr prior to cryo-cooling in liquid nitrogen. , pH pH7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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