4DUH
Crystal structure of 24 kDa domain of E. coli DNA gyrase B in complex with small molecule inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-12-17 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.91841 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 53.236, 51.122, 79.130 |
Unit cell angles | 90.00, 95.68, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.500 |
R-factor | 0.1932 |
Rwork | 0.192 |
R-free | 0.22550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1kzn |
RMSD bond length | 0.018 |
RMSD bond angle | 1.528 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 78.740 | 20.000 | 1.530 |
High resolution limit [Å] | 1.500 | 4.060 | 1.500 |
Rmerge | 0.051 | 0.028 | 0.476 |
Number of reflections | 67478 | ||
<I/σ(I)> | 13.8 | ||
Completeness [%] | 99.2 | 97.3 | 99.6 |
Redundancy | 7.3 | 7.2 | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.4 | 293 | 0.1M MES, 22% PEG 3350, 0.2M NaNO3, pH 6.4, VAPOR DIFFUSION, SITTING DROP, temperature 293K |