4DL9
Crystal structure of S-nitrosoglutathione reductase from tomato (Solanum lycopersicum) in complex with NAD+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-12-15 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.98011 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 82.114, 125.076, 76.761 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.880 - 1.850 |
R-factor | 0.1825 |
Rwork | 0.180 |
R-free | 0.21820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1teh |
RMSD bond length | 0.010 |
RMSD bond angle | 1.090 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.0) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 25.000 | 25.000 | 1.960 |
High resolution limit [Å] | 1.850 | 5.500 | 1.850 |
Rmerge | 0.068 | 0.026 | 0.567 |
Number of reflections | 68193 | ||
<I/σ(I)> | 12.05 | 33.97 | 2.21 |
Completeness [%] | 99.4 | 97.8 | 97.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 0.1 M MES pH 6.5, 14% PEG 20000, 4% glycerol (plus 2.5 mM NAD+ in the drop), VAPOR DIFFUSION, HANGING DROP, temperature 293K |