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4DFM

Crystal structure of the large fragment of DNA polymerase I from Thermus aquaticus in ternary complex with 5-(aminopentinyl)-2-dCTP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyCCD
Collection date2011-06-09
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.99987
Spacegroup nameP 31 2 1
Unit cell lengths108.260, 108.260, 90.070
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution46.878 - 1.886
R-factor0.1875
Rwork0.186
R-free0.21620
Structure solution methodDifference Fourier Techniques
Starting model (for MR)3m8s
RMSD bond length0.008
RMSD bond angle0.992
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX (1.7.3_928)
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.1501.940
High resolution limit [Å]1.8861.890
Number of reflections48761
<I/σ(I)>12.771.83
Completeness [%]98.682
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP829118% PEG 8000, 200mM Mg-Formate, 100 mM Tris pH 8.0 , VAPOR DIFFUSION, HANGING DROP, temperature 291K

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