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4DEQ

Structure of the Neuropilin-1/VEGF-A complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2011-03-21
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.0000
Spacegroup nameP 43
Unit cell lengths114.978, 114.978, 50.946
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.900 - 2.649
R-factor0.21155
Rwork0.209
R-free0.26698
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2qqi
RMSD bond length0.005
RMSD bond angle1.011
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.6.0117)
Data quality characteristics
 Overall
Low resolution limit [Å]20.000
High resolution limit [Å]2.649
Number of reflections18014
Completeness [%]91.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52981.5M Na/K phosphate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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