4C8B
Structure of the kinase domain of human RIPK2 in complex with ponatinib
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Collection date | 2013-06-22 |
Detector | DECTRIS HYBRID PIXEL |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.735, 86.682, 137.335 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.060 - 2.750 |
R-factor | 0.20263 |
Rwork | 0.201 |
R-free | 0.24361 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ppz |
RMSD bond length | 0.010 |
RMSD bond angle | 1.295 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.740 | 2.900 |
High resolution limit [Å] | 2.750 | 2.750 |
Rmerge | 0.120 | 1.030 |
Number of reflections | 18905 | |
<I/σ(I)> | 12.1 | 2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.2 | 7.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 16% PEG3350, 0.1M AMMONIUM CITRATE |