4C5K
Structure of the pyridoxal kinase from Staphylococcus aureus in complex with ADP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-07-18 |
Detector | DECTRIS PILATUS |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.460, 100.360, 167.220 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.780 - 1.400 |
R-factor | 0.12983 |
Rwork | 0.128 |
R-free | 0.16519 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4c5j |
RMSD bond length | 0.015 |
RMSD bond angle | 1.718 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.780 | 1.450 |
High resolution limit [Å] | 1.400 | 1.400 |
Rmerge | 0.050 | 0.980 |
Number of reflections | 200707 | |
<I/σ(I)> | 23.35 | 2 |
Completeness [%] | 97.1 | 93.1 |
Redundancy | 8.9 | 8.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 50MM HEPES, 2M NAH4SO4 |