4BX9
Human Vps33A in complex with a fragment of human Vps16
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2012-05-10 |
| Detector | DECTRIS PILATUS 2M |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 128.410, 128.410, 263.360 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 85.840 - 2.600 |
| R-factor | 0.17762 |
| Rwork | 0.176 |
| R-free | 0.21024 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4bx8 |
| RMSD bond length | 0.017 |
| RMSD bond angle | 1.756 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 87.800 | 2.720 |
| High resolution limit [Å] | 2.600 | 2.600 |
| Rmerge | 0.110 | 1.310 |
| Number of reflections | 68560 | |
| <I/σ(I)> | 16.8 | 2.1 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 15.2 | 14 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | CRYSTALS WERE GROWN IN SITTING DROPS AT 20C. VPS33A:VPS16 COMPLEX (200 NL; A280 = 7.13, APPROX. 8.7 MG/ML) WAS MIXED 1:1 WITH RESERVOIR SOLUTION AND EQUILIBRATED AGAINST 80 UL RESERVOIRS CONTAINING 4% TACSIMATE PH 6.0, 12% PEG 3350 (HAMPTON RESEARCH). CRYSTALS WERE CRYOPROTECTED BY BRIEF IMMERSION IN RESERVOIR SOLUTION SUPPLEMENTED WITH 30% ETHYLENE GLYCOL AND CRYO-COOLED BY PLUNGING INTO LIQUID NITROGEN. |






