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4BEB

MUTANT (K220E) OF THE HSDR SUBUNIT OF THE ECOR124I RESTRICTION ENZYME IN COMPLEX WITH ATP

Replaces:  2Y3T
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X11
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX11
Temperature [K]100
Detector technologyCCD
DetectorMARRESEARCH MX-555
Spacegroup nameP 1 21 1
Unit cell lengths127.112, 123.112, 160.110
Unit cell angles90.00, 111.48, 90.00
Refinement procedure
Resolution19.885 - 2.989
R-factor0.2555
Rwork0.255
R-free0.29650
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2w00
RMSD bond length0.004
RMSD bond angle0.999
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP (IN AUTO-RICKSHAW PACKAGE)
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0003.170
High resolution limit [Å]2.9892.989
Rmerge0.1200.400
Number of reflections92081
<I/σ(I)>10.73.7
Completeness [%]98.896.2
Redundancy4.24.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2936UL PROTEIN MIXED WITH 0.8UL OF 2M NH4F AND 2UL WELL SOLUTION OF 22% W/V PEG4K, 0.1M MES PH 5.7. 20C, SITTING DROP

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PDB entries from 2025-06-18

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