4AVK
Structure of trigonal FimH lectin domain crystal soaked with an alpha- D-mannoside O-linked to propynyl pyridine at 2.4A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-11-23 |
Detector | ADSC CCD |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 90.460, 90.460, 79.540 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 24.811 - 2.400 |
R-factor | 0.1682 |
Rwork | 0.166 |
R-free | 0.20570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2vco |
RMSD bond length | 0.011 |
RMSD bond angle | 1.448 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 2.600 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.110 | 0.380 |
Number of reflections | 16232 | |
<I/σ(I)> | 14 | 5.2 |
Completeness [%] | 99.9 | 92.7 |
Redundancy | 7.2 | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 8.6 | 1 M LI2SO4, 100 MM TRIS PH 8.6, 10 MM NICL2, 0.2 M NON-DETERGENT SULFOBETAINE 201 |