4AJB
3D structure of E. coli Isocitrate Dehydrogenase K100M mutant in complex with Isocitrate, magnesium(II) and thioNADP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | MARMOSAIC 225 mm CCD |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 103.054, 103.054, 150.339 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.744 - 1.900 |
R-factor | 0.1671 |
Rwork | 0.166 |
R-free | 0.18050 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ai2 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.079 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.800 | 2.010 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.080 | 0.540 |
Number of reflections | 64372 | |
<I/σ(I)> | 18.2 | 3.2 |
Completeness [%] | 99.4 | 96.1 |
Redundancy | 7.3 | 7.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 1.85M NH4SO4, 50 MM CITRIC ACID/NA2HPO4 BUFFER PH 5.2, 0.1 M NACL AND 0.2 M DTT |