4ZXF
Crystal Structure of a Soluble Variant of Monoglyceride Lipase from Saccharomyces Cerevisiae in Complex with a Substrate Analog
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-12-15 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.97939 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 76.760, 107.130, 165.450 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 65.476 - 2.500 |
R-factor | 0.2041 |
Rwork | 0.201 |
R-free | 0.25680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zwn |
RMSD bond length | 0.004 |
RMSD bond angle | 0.806 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 165.450 | 82.725 | 2.640 |
High resolution limit [Å] | 2.500 | 7.910 | 2.500 |
Rmerge | 0.046 | 0.846 | |
Rmeas | 0.202 | ||
Rpim | 0.093 | 0.024 | 0.455 |
Total number of observations | 215498 | 6966 | 29110 |
Number of reflections | 47793 | ||
<I/σ(I)> | 6.5 | 18.3 | 1.8 |
Completeness [%] | 99.7 | 99.2 | 99.6 |
Redundancy | 4.5 | 4.2 | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.7 | 293.15 | 0.1 M Bicine/Trizma base pH 8.7, 10% w/v PEG 20 000, 20% v/v PEG MME 550 and 0.03 M sodium nitrate, 0.03 M disodium hydrogen phosphate, 0.03 M ammonium sulphate, Microseeding |