4Z96
Crystal structure of DNMT1 in complex with USP7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-12-17 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9774 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 124.044, 124.044, 153.014 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.960 - 2.850 |
R-factor | 0.2037 |
Rwork | 0.201 |
R-free | 0.24560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ylm |
RMSD bond length | 0.010 |
RMSD bond angle | 1.358 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.950 |
High resolution limit [Å] | 2.850 | 2.850 |
Rmerge | 0.077 | 0.683 |
Number of reflections | 31086 | |
<I/σ(I)> | 20.6 | 2 |
Completeness [%] | 94.8 | 96.8 |
Redundancy | 5.8 | 5.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 277 | 0.1 M sodium citrate, pH5.5, 10% PEG6000, 15% glycerol |