4Z20
Crystal Structure of Meganuclease I-SmaMI Bound to Uncleaveable DNA with a TTGT Central Four
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-12-23 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.690, 172.262, 59.994 |
Unit cell angles | 90.00, 92.36, 90.00 |
Refinement procedure
Resolution | 86.130 - 3.200 |
R-factor | 0.2361 |
Rwork | 0.233 |
R-free | 0.29120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4lox |
RMSD bond length | 0.010 |
RMSD bond angle | 1.343 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 86.130 | 50.000 | 3.110 |
High resolution limit [Å] | 3.000 | 6.460 | 3.000 |
Rmerge | 0.064 | 0.025 | 0.795 |
Rmeas | 0.075 | 0.029 | 0.929 |
Rpim | 0.039 | 0.015 | 0.478 |
Total number of observations | 69222 | ||
Number of reflections | 18370 | ||
<I/σ(I)> | 19.3 | ||
Completeness [%] | 98.9 | 98.7 | 98.3 |
Redundancy | 3.8 | 3.7 | 3.7 |
CC(1/2) | 0.999 | 0.805 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 298 | 25% PEG 2000 MME, 5mM CaCl2 |