4YV5
Crystal Structure of Myotoxin II from Bothrops moojeni complexed to Suramin
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | LNLS BEAMLINE W01B-MX2 |
| Synchrotron site | LNLS |
| Beamline | W01B-MX2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-04-02 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 1.425 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 50.795, 63.646, 87.721 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 31.823 - 1.900 |
| R-factor | 0.1964 |
| Rwork | 0.195 |
| R-free | 0.22720 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4kf3 |
| RMSD bond length | 0.005 |
| RMSD bond angle | 1.135 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER (2.5.3) |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.970 |
| High resolution limit [Å] | 1.900 | 4.090 | 1.900 |
| Rmerge | 0.127 | 0.053 | 0.700 |
| Rmeas | 0.144 | 0.060 | 0.789 |
| Rpim | 0.066 | 0.026 | 0.360 |
| Total number of observations | 108433 | ||
| Number of reflections | 23072 | ||
| <I/σ(I)> | 5.9 | ||
| Completeness [%] | 99.8 | 98.8 | 99.9 |
| Redundancy | 4.7 | 4.8 | 4.9 |
| CC(1/2) | 0.996 | 0.711 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 291 | 30% (w/v) PEG 4000, 0.1 M Tris HCl pH 8.5 and 0.2 M Lithium Sulfate |






