4XKJ
a Novel D-lactate Dehydrogenase from Sporolactobacillus sp
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-04-14 |
Detector | RIGAKU RAXIS HTC |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.263, 109.505, 113.003 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.534 - 3.148 |
R-factor | 0.2133 |
Rwork | 0.204 |
R-free | 0.29220 |
Starting model (for MR) | 2yq4 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.439 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((phenix.refine: 1.7_650)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.200 |
High resolution limit [Å] | 3.148 | 3.150 |
Rmerge | 0.290 | |
Number of reflections | 13247 | |
<I/σ(I)> | 9.4 | |
Completeness [%] | 96.4 | |
Redundancy | 6.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | Ammonium acetate,Sodium citrate tribasic dihydrate,Polyethylene glycol 4000 |