4XJ5
Crystal structure of Vibrio cholerae DncV 3'-deoxy GTP bound form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-01-19 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 117.950, 50.060, 72.270 |
Unit cell angles | 90.00, 93.40, 90.00 |
Refinement procedure
Resolution | 46.997 - 1.552 |
R-factor | 0.1757 |
Rwork | 0.175 |
R-free | 0.19330 |
Structure solution method | SAD |
Starting model (for MR) | 4xj1 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.338 |
Data reduction software | XDS |
Phasing software | MOLREP |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 50.000 |
High resolution limit [Å] | 1.550 |
Number of reflections | 60205 |
<I/σ(I)> | 17.6 |
Completeness [%] | 98.5 |
Redundancy | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | PEG3350, sodium fluoride, Bis-Tris propane |