4X5X
HLA-DR1 mutant bN82A with covalently linked CLIP106-120(M107W)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-01-13 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.91841 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 57.821, 86.467, 94.110 |
Unit cell angles | 90.00, 103.96, 90.00 |
Refinement procedure
Resolution | 34.247 - 3.199 |
R-factor | 0.2223 |
Rwork | 0.220 |
R-free | 0.26240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1dlh |
RMSD bond length | 0.002 |
RMSD bond angle | 0.693 |
Data reduction software | XDS |
Data scaling software | Aimless (0.2.17) |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 34.250 | 34.250 | 3.420 |
High resolution limit [Å] | 3.199 | 9.050 | 3.200 |
Rmerge | 0.192 | 0.070 | 0.473 |
Total number of observations | 45860 | 1947 | 8263 |
Number of reflections | 14844 | ||
<I/σ(I)> | 5.5 | 12.2 | 2.5 |
Completeness [%] | 99.1 | 94.6 | 99.4 |
Redundancy | 3.1 | 3 | 3.1 |
CC(1/2) | 0.974 | 0.995 | 0.817 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 0.2M Sodium nitrate, 20% w/v PEG 3350, 0.1M Bis Tris propane pH 7.5 |