4WQ3
Human calpain PEF(S) with (2Z,2Z')-2,2'-disulfanediylbis(3-(6-bromoindol-3-yl)acrylic acid) bound
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2013-03-16 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 0.920 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 49.560, 79.310, 57.020 |
| Unit cell angles | 90.00, 91.47, 90.00 |
Refinement procedure
| Resolution | 39.650 - 1.790 |
| R-factor | 0.1795 |
| Rwork | 0.178 |
| R-free | 0.21490 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4phj |
| RMSD bond length | 0.021 |
| RMSD bond angle | 2.024 |
| Data reduction software | xia2 |
| Data scaling software | Aimless (0.1.27) |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 39.650 | 39.650 | 1.840 |
| High resolution limit [Å] | 1.790 | 8.010 | 1.790 |
| Rmerge | 0.071 | 0.038 | 0.634 |
| Rpim | 0.043 | 0.021 | 0.368 |
| Total number of observations | 150579 | 1880 | 12226 |
| Number of reflections | 40565 | ||
| <I/σ(I)> | 11 | 29.6 | 2 |
| Completeness [%] | 97.6 | 96.5 | 99.8 |
| Redundancy | 3.7 | 3.9 | 3.9 |
| CC(1/2) | 0.994 | 0.998 | 0.744 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 294 | 3 UL PROTEIN (10 MG/ML PEF(S), 5 MM SODIUM CACODYLATE, 2 MM EDTA, 5 MM BME, 1 MM CALCIUM CHLORIDE, PH 7.0) + 3 UL PRECIPITANT (50 MM SODIUM CACODYLATE, 12.5% PEG6000, 20 MM CALCIUM CHLORIDE, PH 7.0) + 1 UL WATER |






