4UDW
Thrombin in complex with 1-(2R)-2-amino-3-phenyl-propanoyl-N-(2, 5dichlorophenyl)methylpyrrolidine-2-carboxamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 113 |
Detector technology | PIXEL |
Collection date | 2013-11-14 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 69.640, 71.106, 72.327 |
Unit cell angles | 90.00, 100.44, 90.00 |
Refinement procedure
Resolution | 71.131 - 1.160 |
R-factor | 0.1247 |
Rwork | 0.124 |
R-free | 0.14130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1h8d |
RMSD bond length | 0.012 |
RMSD bond angle | 1.506 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 71.130 | 1.200 |
High resolution limit [Å] | 1.160 | 1.160 |
Rmerge | 0.020 | 0.470 |
Number of reflections | 116096 | |
<I/σ(I)> | 25.92 | 2.7 |
Completeness [%] | 97.0 | 87.9 |
Redundancy | 4.4 | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 7.5 | SEE MATERIALS AND METHODS SECTION OF PUBLICATION, pH 7.5 |