Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4UDW

Thrombin in complex with 1-(2R)-2-amino-3-phenyl-propanoyl-N-(2, 5dichlorophenyl)methylpyrrolidine-2-carboxamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]113
Detector technologyPIXEL
Collection date2013-11-14
DetectorDECTRIS PILATUS 6M
Spacegroup nameC 1 2 1
Unit cell lengths69.640, 71.106, 72.327
Unit cell angles90.00, 100.44, 90.00
Refinement procedure
Resolution71.131 - 1.160
R-factor0.1247
Rwork0.124
R-free0.14130
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1h8d
RMSD bond length0.012
RMSD bond angle1.506
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]71.1301.200
High resolution limit [Å]1.1601.160
Rmerge0.0200.470
Number of reflections116096
<I/σ(I)>25.922.7
Completeness [%]97.087.9
Redundancy4.43.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
17.5SEE MATERIALS AND METHODS SECTION OF PUBLICATION, pH 7.5

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon