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4TQP

Human transthyretin (TTR) complexed with (R)-3-(9H-fluoren-9-ylideneaminooxy)-2-methyl-N-(methylsulfonyl) propionamide in a dual binding mode

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2014-01-30
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.87006
Spacegroup nameP 21 21 2
Unit cell lengths43.121, 86.081, 63.473
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution51.090 - 1.580
R-factor0.14441
Rwork0.141
R-free0.19761
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4tqi
RMSD bond length0.023
RMSD bond angle2.150
Data scaling softwareXDS
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]51.1001.640
High resolution limit [Å]1.5801.580
Rmerge0.125
Number of reflections33100
<I/σ(I)>14.121.87
Completeness [%]99.999.9
Redundancy9.199.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.7293Protein: 5 mg/ml in 0.05 M NaCl, 0.05 M sodium acetate, pH 5.5. Precipitant: 60% (30% PEG-4K, 0.2 M imidazole malate, pH 6.0) and 40% (MPEG-5K, 0.1 M sodium acetate, pH 5.5). Cryoprotectant: 40% (25 % diethylene glycol, 12.5 % MPD, 37.5 % 2,3-butanediol, 12.5 % 1,4-dioxane), 12.5% MPEG 5K, 25% MPEG 550, 0.1 M (sodium propionate, sodium cacodylate, Bis-Tris-propane: 50% component A pH 4; 50% B pH 9.5) with 1 milli-M ligand.

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