4TN7
Crystal structure of mouse KDM2A-H3K36ME-NO complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-02-12 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 55.063, 157.928, 48.706 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.166 - 2.200 |
R-factor | 0.232 |
Rwork | 0.229 |
R-free | 0.27940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2yu1 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.532 |
Refinement software | PHENIX ((phenix.refine: dev_1760)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.250 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.482 | |
Number of reflections | 40902 | |
<I/σ(I)> | 9.1 | 1.8 |
Completeness [%] | 97.9 | 97.5 |
Redundancy | 2.9 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 100 mM Li-citrate 18-30% PEG 3350 |