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4QYD

Crystal Structure of the human BRPF1 bromodomain in complex with a histone H4K12ac peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2013-04-24
DetectorADSC QUANTUM 315r
Spacegroup nameP 43 21 2
Unit cell lengths75.100, 75.100, 86.300
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.430 - 1.940
R-factor0.177
Rwork0.175
R-free0.21300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2d9e
RMSD bond length0.007
RMSD bond angle0.950
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: dev_1402))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.4302.010
High resolution limit [Å]1.9401.940
Rmerge0.1390.279
Number of reflections18780
<I/σ(I)>25.8414.66
Completeness [%]99.996.9
Redundancy27.727.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
17.52770.1 M HEPES, pH 7.5, 10% w/v polyethylene glycol (PEG) 6,000, 5% v/v (+/-)-2-methyl-2,4-pentanediol (MPD), VAPOR DIFFUSION, HANGING DROP, temperature 277K

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