4PWG
Crystal structure of V30M mutant human transthyretin complexed with caffeic acid ethyl ester
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NE3A |
Synchrotron site | Photon Factory |
Beamline | AR-NE3A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-11-17 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 43.190, 85.541, 63.771 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.391 - 1.798 |
R-factor | 0.1919 |
Rwork | 0.189 |
R-free | 0.24290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4pwe |
RMSD bond length | 0.007 |
RMSD bond angle | 1.106 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHENIX (1.8_1069) |
Refinement software | PHENIX ((phenix.refine: 1.8_1069)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.400 | 1.830 |
High resolution limit [Å] | 1.798 | 1.800 |
Rmerge | 0.101 | 0.559 |
Number of reflections | 21207 | |
<I/σ(I)> | 16.6 | 1.5 |
Completeness [%] | 93.8 | 85.1 |
Redundancy | 3.6 | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 10-30% PEG400, 0.1M HEPES, 0.2M CaCl2, 12mM caffeic acid ethyl ester, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |