4PID
Crystal structure of human adenovirus 2 protease with a weak pyrimidine nitrile inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-11-20 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 61 |
Unit cell lengths | 112.783, 112.783, 50.347 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.840 - 1.590 |
R-factor | 0.1661 |
Rwork | 0.165 |
R-free | 0.18920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1nln |
RMSD bond length | 0.034 |
RMSD bond angle | 2.786 |
Data scaling software | XSCALE (Jan 30, 2009) |
Refinement software | REFMAC (5.5.0102) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 97.700 | 1.630 | |
High resolution limit [Å] | 1.590 | 7.110 | 1.590 |
Rmerge | 0.063 | 0.029 | 0.542 |
Rmeas | 0.066 | 0.030 | 0.571 |
Total number of observations | 495405 | ||
Number of reflections | 49317 | 594 | 3630 |
<I/σ(I)> | 22.95 | 62.86 | 4.28 |
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 10 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.8 M sodium/potassium tartrate, 0.1 M HEPES pH 7.5 |