4MZV
Crystal structure of extracellular part of human EpCAM
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | BRUKER AXS MICROSTAR |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2010-02-02 |
| Detector | Bruker Platinum 135 |
| Wavelength(s) | 1.542 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 88.022, 50.385, 67.828 |
| Unit cell angles | 90.00, 128.33, 90.00 |
Refinement procedure
| Resolution | 27.790 - 1.865 |
| R-factor | 0.1965 |
| Rwork | 0.194 |
| R-free | 0.24910 |
| Structure solution method | SAD |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.273 |
| Data reduction software | PROTEUM2 |
| Data scaling software | PROTEUM2 |
| Phasing software | SOLVE |
| Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 27.794 | 27.790 | 1.910 |
| High resolution limit [Å] | 1.860 | 5.060 | 1.860 |
| Number of reflections | 18527 | ||
| <I/σ(I)> | 33.98 | 86.54 | 2.6 |
| Completeness [%] | 99.2 | 99.6 | 85.5 |
| Redundancy | 26.6 | 46.19 | 6.33 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.2M magnesium chloride, 0.1M TRIS-HCl, 30% w/v PEG 4000, 0.16 mM decyl-beta-D-maltopyranoside, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K |






