4MZG
Crystal structure of human Spindlin1 bound to histone H3K4me3 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 77 |
Detector technology | CCD |
Collection date | 2012-06-28 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9794 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 43.168, 122.037, 49.837 |
Unit cell angles | 90.00, 91.71, 90.00 |
Refinement procedure
Resolution | 32.144 - 1.698 |
R-factor | 0.184 |
Rwork | 0.183 |
R-free | 0.20710 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.168 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.220 | 1.730 |
High resolution limit [Å] | 1.698 | 2.140 | 1.698 |
Rmerge | 0.057 | 0.088 | 0.645 |
Number of reflections | 56230 | ||
<I/σ(I)> | 24.8 | 19.3 | 2.64 |
Completeness [%] | 99.6 | 100 | 99.6 |
Redundancy | 4.4 | 4.4 | 4.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291.15 | 37.5% MPD_P1K_P3350, 0.1M bicine/Trizma, pH 8.5, 0.06M MgCl2/CaCl2, VAPOR DIFFUSION, SITTING DROP, temperature 291.15K |