4MR5
Crystal Structure of the second bromodomain of human BRD2 in complex with a quinazolinone ligand (RVX-OH)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-02-14 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.52 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 52.220, 72.008, 32.039 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.220 - 1.630 |
R-factor | 0.1374 |
Rwork | 0.136 |
R-free | 0.16980 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.015 |
RMSD bond angle | 1.626 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.490 | 19.490 | 1.720 |
High resolution limit [Å] | 1.630 | 5.150 | 1.630 |
Rmerge | 0.038 | 0.024 | 0.170 |
Number of reflections | 15616 | ||
<I/σ(I)> | 21.8 | 41.5 | 6 |
Completeness [%] | 99.5 | 97.3 | 99.5 |
Redundancy | 4.3 | 4.2 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 0.20M Na(formate), 0.1M BTProp, 20.0% PEG 3350 10.0% EtGly, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K |