Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4LDE

Structure of beta2 adrenoceptor bound to BI167107 and an engineered nanobody

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]78
Detector technologyCCD
Collection date2012-12-13
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.033
Spacegroup nameP 21 21 21
Unit cell lengths49.670, 66.480, 303.100
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.400 - 2.790
R-factor0.2284
Rwork0.227
R-free0.25590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3p0g
RMSD bond length0.005
RMSD bond angle0.725
Data reduction softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: dev_1241))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.4002.900
High resolution limit [Å]2.7902.800
Rmerge0.1750.584
Number of reflections25028
<I/σ(I)>4.51.8
Completeness [%]95.881.9
Redundancy3.92.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE6.5293100 mM MES pH 6.2-6.7, 40-100 mM ammonium phosphate dibasic, 18-24% PEG400, LIPIDIC CUBIC PHASE, temperature 293K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon