4KZ8
Crystal structure of AmpC beta-lactamase in complex with fragment 20 (1,3-diethyl-2-thioxodihydropyrimidine-4,6(1H,5H)-dione)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2012-05-31 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.115869 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 117.610, 77.800, 98.690 |
Unit cell angles | 90.00, 116.59, 90.00 |
Refinement procedure
Resolution | 29.857 - 2.282 |
R-factor | 0.1626 |
Rwork | 0.161 |
R-free | 0.21270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ke4 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.930 |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (dev_1314) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.857 | 2.340 | |
High resolution limit [Å] | 2.280 | 10.210 | 2.280 |
Rmerge | 0.032 | 0.014 | 0.106 |
Number of reflections | 32352 | 408 | 2605 |
<I/σ(I)> | 28.12 | 61.31 | 10.72 |
Completeness [%] | 88.8 | 92.9 | 98.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.8 | 293 | 1.7 M potassium phosphate, pH 8.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K |