4KRR
Crystal structure of Drosophila WntD N-terminal domain-linker (residues 31-240)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-03-28 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.97945 |
Spacegroup name | P 41 |
Unit cell lengths | 59.625, 59.625, 66.955 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.812 - 2.124 |
R-factor | 0.1805 |
Rwork | 0.179 |
R-free | 0.20350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4f0a |
RMSD bond length | 0.002 |
RMSD bond angle | 0.561 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHASER (2.3.0) |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 59.625 | 29.813 | 2.240 |
High resolution limit [Å] | 2.124 | 6.720 | 2.124 |
Rmerge | 0.016 | 0.016 | |
Total number of observations | 5592 | 26418 | |
Number of reflections | 13301 | ||
<I/σ(I)> | 23.2 | 22.6 | 0.5 |
Completeness [%] | 99.9 | 98.1 | 99.9 |
Redundancy | 13.5 | 12.9 | 13.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 283 | 20% PEG 1000, 0.1M Bis-Tris, 0.2M magnesium chloride, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 283K |