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4KRL

Nanobody/VHH domain 7D12 in complex with domain III of the extracellular region of EGFR, pH 6.0

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]100
Detector technologyCCD
Collection date2008-12-06
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.033
Spacegroup nameP 61 2 2
Unit cell lengths148.048, 148.048, 82.510
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution41.786 - 2.849
R-factor0.2152
Rwork0.213
R-free0.26770
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB ENTRIES 3B2U AND 4KRN
RMSD bond length0.004
RMSD bond angle0.771
Data reduction softwareHKL-3000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.2_1309)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.950
High resolution limit [Å]2.8496.1402.849
Rmerge0.1170.0480.574
Number of reflections12683
<I/σ(I)>7.8
Completeness [%]98.199.482.9
Redundancy10.810.94.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP629322.5% PEG3350, 50 mM potassium iodide, 0.1 M MES, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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