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4JK0

Crystal structure of T89Q-mutant of RNA silencing suppressor p19 with 2nt-5'-overhanging double-helical RNA 21mer pUUUG(CUG)5CU

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315r
Wavelength(s)0.9724
Spacegroup nameH 3 2
Unit cell lengths90.391, 90.391, 148.909
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution15.000 - 2.300
R-factor0.1867
Rwork0.184
R-free0.24550
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1r9f
RMSD bond length0.013
RMSD bond angle1.550
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareREFMAC
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.00030.0002.380
High resolution limit [Å]2.3004.9502.300
Rmerge0.1180.0640.630
Number of reflections10511
<I/σ(I)>9.1
Completeness [%]98.694.698.5
Redundancy2.72.72.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP52911.6 M ammonium sulfate, 0.1 M citric acid, pH 5, VAPOR DIFFUSION, HANGING DROP, temperature 291K

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PDB entries from 2024-05-15

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