4J8R
Structure of an octapeptide repeat of the prion protein bound to the POM2 Fab antibody fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-05-28 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 65.415, 71.567, 207.592 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.597 - 2.303 |
R-factor | 0.2474 |
Rwork | 0.247 |
R-free | 0.25740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4dgi |
RMSD bond length | 0.028 |
RMSD bond angle | 1.933 |
Data reduction software | autoXDS |
Data scaling software | autoXDS |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.600 | 2.350 |
High resolution limit [Å] | 2.300 | 2.300 |
Number of reflections | 44080 | |
<I/σ(I)> | 10.82 | |
Completeness [%] | 99.8 | 98 |
Redundancy | 7.24 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 28% PEG 1000, 0.1M HEPES, 0.2M Calcium Chloride, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K |