4HCO
Human Plk1-PBD in complex with Thymoquinone at the phophopeptide binding site
Replaces: 4H70Replaces: 3MQ8Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU FR-E SUPERBRIGHT |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2009-05-29 |
| Detector | MAR scanner 345 mm plate |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 33.260, 102.150, 67.740 |
| Unit cell angles | 90.00, 93.96, 90.00 |
Refinement procedure
| Resolution | 51.070 - 2.750 |
| R-factor | 0.20956 |
| Rwork | 0.206 |
| R-free | 0.28020 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1umw |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.126 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.5.0110) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 51.070 | 2.900 |
| High resolution limit [Å] | 2.750 | 2.750 |
| Rmerge | 0.154 | 0.387 |
| Number of reflections | 11125 | |
| <I/σ(I)> | 5.3 | 2.8 |
| Completeness [%] | 94.6 | 91.5 |
| Redundancy | 2.4 | 2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 291 | 1.4M Sodium Potassium Tartrate, 50mM MES pH 6.5, 100mM Hepes pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K |






