4G5D
X-ray crystal structure of Prostaglandin f synthase from Leishmania major Friedlin bound to NADPH
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-07-05 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.54 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 94.660, 34.590, 106.950 |
Unit cell angles | 90.00, 102.98, 90.00 |
Refinement procedure
Resolution | 46.189 - 1.800 |
R-factor | 0.1744 |
Rwork | 0.172 |
R-free | 0.21760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4f40 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.332 |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.8_1069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.850 | |
High resolution limit [Å] | 1.800 | 8.050 | 1.800 |
Rmerge | 0.096 | 0.036 | 0.515 |
Number of reflections | 61422 | 799 | 4020 |
<I/σ(I)> | 13.36 | 35.51 | 2.62 |
Completeness [%] | 96.5 | 98.8 | 86.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 289 | JCSG+ B8: 10% PEG8000, 200 mM magnesium chloride, 100 mM Tris, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 289K |