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4EBK

Crystal structure of aminoglycoside 4'-O-adenylyltransferase ANT(4')-IIb, tobramycin-bound

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyCCD
Collection date2011-06-22
DetectorRIGAKU SATURN A200
Wavelength(s)1.54178
Spacegroup nameP 21 21 21
Unit cell lengths81.906, 84.451, 98.762
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution23.893 - 2.150
R-factor0.1741
Rwork0.172
R-free0.22130
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ebj
RMSD bond length0.008
RMSD bond angle1.142
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]24.0002.190
High resolution limit [Å]2.1502.150
Number of reflections37909
<I/σ(I)>16.452.02
Completeness [%]99.9100
Redundancy7.67.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72980.2 M sodium iodide, 20% PEG 3350, 10 mM tobramycin, 5 mM ATP, cryoprotectant: 25% ethylene glycol, 2 mM CaCl2, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K

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