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4E8R

Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Cs+ and Mg2+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyCCD
Collection date2011-08-10
DetectorADSC QUANTUM 315
Wavelength(s)1.4861
Spacegroup nameP 21 21 21
Unit cell lengths90.200, 94.915, 225.710
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.500 - 3.360
R-factor0.20325
Rwork0.200
R-free0.25799
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3igi
RMSD bond length0.007
RMSD bond angle2.392
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.6.0117)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.5033.450
High resolution limit [Å]3.3603.360
Rmerge0.0810.967
Number of reflections26102
<I/σ(I)>15.12
Completeness [%]97.596.8
Redundancy76.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7303100 mM magnesium acetate, 200 mM cesium chloride, 50 mM HEPES sodium, pH 7.0, 4% PEG8000, VAPOR DIFFUSION, HANGING DROP, temperature 303K

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PDB entries from 2026-01-07

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