4DQI
Ternary complex of Bacillus DNA Polymerase I Large Fragment, DNA duplex, and dCTP (paired with dG of template)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Detector technology | CCD |
Collection date | 2008-12-07 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 93.680, 109.360, 150.320 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.768 - 1.690 |
R-factor | 0.1594 |
Rwork | 0.158 |
R-free | 0.18480 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 2hvi |
RMSD bond length | 0.011 |
RMSD bond angle | 1.347 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | PHENIX (dev_1026) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.790 |
High resolution limit [Å] | 1.690 | 5.030 | 1.690 |
Rmerge | 0.066 | 0.033 | 0.491 |
Number of reflections | 155734 | ||
<I/σ(I)> | 14.62 | 37.81 | 3.29 |
Completeness [%] | 90.2 | 94.9 | 94.9 |
Redundancy | 5.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.8 | 290 | Ammonium Sulfate, MPD, MgSO4, MES, pH 5.8, vapor diffusion, hanging drop, temperature 290K |