4DFM
Crystal structure of the large fragment of DNA polymerase I from Thermus aquaticus in ternary complex with 5-(aminopentinyl)-2-dCTP
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X06DA |
| Synchrotron site | SLS |
| Beamline | X06DA |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2011-06-09 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.99987 |
| Spacegroup name | P 31 2 1 |
| Unit cell lengths | 108.260, 108.260, 90.070 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 46.878 - 1.886 |
| R-factor | 0.1875 |
| Rwork | 0.186 |
| R-free | 0.21620 |
| Structure solution method | Difference Fourier Techniques |
| Starting model (for MR) | 3m8s |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.992 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHENIX (1.7.3_928) |
| Refinement software | PHENIX ((phenix.refine: 1.7.3_928)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 47.150 | 1.940 |
| High resolution limit [Å] | 1.886 | 1.890 |
| Number of reflections | 48761 | |
| <I/σ(I)> | 12.77 | 1.83 |
| Completeness [%] | 98.6 | 82 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8 | 291 | 18% PEG 8000, 200mM Mg-Formate, 100 mM Tris pH 8.0 , VAPOR DIFFUSION, HANGING DROP, temperature 291K |






