4CCH
Crystal structure of the large fragment of DNA polymerase I from Thermus Aquaticus in an open binary complex with d5SICS as templating nucleotide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-04-09 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 114.262, 114.262, 91.537 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.526 - 2.550 |
R-factor | 0.2098 |
Rwork | 0.207 |
R-free | 0.26080 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3m8s |
RMSD bond length | 0.005 |
RMSD bond angle | 0.770 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.500 | 2.700 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmerge | 0.200 | 1.440 |
Number of reflections | 22906 | |
<I/σ(I)> | 9.16 | 0.65 |
Completeness [%] | 99.9 | 99.7 |
Redundancy | 9 | 7.1 |
CC(1/2) | 0.992 | 0.523 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 8 | 20% W/V PEG 8000, 0.1M TRIS PH 8.0, 0.2M MAGNESIUM FORMATE, 20% GLYCEROL |