3ZDF
Structure of GAPDH with CP12 peptide from Thermosynechococcus elongatus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-03-03 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 141.450, 141.450, 77.390 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 63.260 - 2.340 |
R-factor | 0.17539 |
Rwork | 0.173 |
R-free | 0.21464 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3zcx |
RMSD bond length | 0.015 |
RMSD bond angle | 1.746 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 63.260 | 2.400 |
High resolution limit [Å] | 2.340 | 2.340 |
Rmerge | 0.140 | 0.650 |
Number of reflections | 33680 | |
<I/σ(I)> | 5.38 | 1.18 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 6.61 | 6.53 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 0.1 M BICINE PH 9, 10 % W/V PEG 20,000/ 2% V/V DIOXANE |