Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3ZDA

Structure of E. coli ExoIX in complex with a fragment of the Flap1 DNA oligonucleotide, potassium and magnesium

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyCCD
Collection date2008-12-16
DetectorADSC CCD
Spacegroup nameP 21 21 2
Unit cell lengths66.203, 154.820, 34.473
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution51.640 - 1.500
R-factor0.21184
Rwork0.211
R-free0.23490
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3zd9
RMSD bond length0.015
RMSD bond angle1.547
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.5.0070)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]51.6401.580
High resolution limit [Å]1.5001.500
Rmerge0.1000.480
Number of reflections57905
<I/σ(I)>22.53.4
Completeness [%]99.999.8
Redundancy9.97
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
160.2 M MAGNESIUM ACETATE, 15% (W/V) PEG-3350, pH 6.0

250359

PDB entries from 2026-03-11

PDB statisticsPDBj update infoContact PDBjnumon