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3ZC5

X-ray Structure of c-Met kinase in complex with inhibitor (S)-6-(1-(6- (1-methyl-1H-pyrazol-4-yl)-(1,2,4)triazolo(4,3-b)pyridazin-3-yl)ethyl) quinoline.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]95
Detector technologyCCD
Collection date2006-05-01
DetectorADSC CCD
Spacegroup nameP 21 21 2
Unit cell lengths76.997, 94.509, 46.834
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.260 - 2.200
Rwork0.204
R-free0.25600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2wgj
RMSD bond length0.006
RMSD bond angle0.800
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareCCP4
Refinement softwareCNX (2005)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.250
High resolution limit [Å]2.2002.200
Rmerge0.1000.430
Number of reflections16974
<I/σ(I)>12.91.98
Completeness [%]93.771.6
Redundancy3.72.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.6286C-MET COCRYSTALS WERE OBTAINED AT 13 DEGREES C BY THE HANGING DROP VAPOR DIFFUSION METHOD BY MIXING 1.2 MICROL OF PROTEIN SOLUTION (CONTAINING 7-13 MG/ML C-MET KD (RESIDUES 1051-1348) WITH A 5 FOLD MOLAR EXCESS OF SELECTED C-MET INHIBITOR) WITH 1.2 MICROL OF SOLUTION CONTAINING (0.05 M CITRATE-PHOSPHATE PH 4.6, 0-0.275 M NACL, AND 17-21% POLYETHYLENE GLYCOL MW=3350).

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